HJT has given a response. good luck, sounds like a nightmare(I've posted my HijackThis log, no responses)
IE shares many underlining files with any Windows Operating System.
Removal removes Operating System files needed for other applications.
Trying a Reinstall/ Repair is Operating System specific. Are you using 98?
Here are some links to read:
http://www.broomeman.com/support/wsiedown.html
http://support.microsoft.com/?kbid=174680
http://support.microsoft.com/?kbid=293907
http://support.microsoft.com/kb/185836/EN-US/